részletes keresés


Last updated: 2009-11-30

Scientific articles

  • > Irimia, D., Balázsi, G., Agrawal, N., Toner, M. (2009): Adaptive-Control Model for Neutrophil Orientation in the Direction of Chemical Gradients. - Biophys. J. 96(10): 3897-3916. IF: 4.63 [pdf, 2025k]
  • > Nevozhay, D., Adams, R., Murphy, K.F., Josić, K., Balázsi, G. (2009): Negative autoregulation linearizes the dose-response and suppresses the heterogeneity of gene expression. - Proc Natl Acad Sci U S A 106(13): 5123-5128. IF: 9.38 [pdf, 289k]
  • > Veiga, D.F.T., Dutta, B., Balázsi, G. (2009) Network inference and network response identification: Moving genome-scale data to the next level of biological discovery. Mol. BioSystems (in press). IF: 4.12
  • > Balázsi, G., Heath, A.P., Shi, L., Gennaro, M.L. (2008): The temporal response of the Mycobacterium tuberculosis gene regulatory network during growth arrest. - Mol Syst Biol. 4, 225: 1-8. IF: 12.24 [pdf, 2856.7k]
  • > Ernst, J., Beg, Q.K., Kay, K.A., Balázsi, G., Oltvai, Z.N., Bar-Joseph, Z. (2008): A semi-supervised method for predicting transcription factor-gene interactions in Escherichia coli. - PLoS Comput Biol. 4(3) e1000044: 1-14. IF: 6.24 [pdf, 567.1k]
  • > Heath, A.P., Kavraki, L., Balázsi, G. (2008): Bipolarity of the Saccharomyces cerevisiae Genome. - IEEE 2nd Intl. Conf. Bioinformatics and Biomedical Engineering, pp. 330-333.
  • > Balázsi, G., Collins, J.J. (2007): Taking the inventory inside single cells. News and Views. - Nature Chemical Biology 3(3): 141-142. IF: 14.612 [pdf, 1326.6k]
  • > Murphy, K.F., Balázsi, G., Collins, J.J. (2007): Combinatorial promoter design for engineering noisy gene expression. - Proc. Nat. Acad. Sci. USA. 104(31): 12726-12731. IF: 9.38 [pdf, 592k]
  • > Strickler, J.R., Balázsi, G. (2007): Planktonic copepods reacting selectively to disturbances. - Phil. Trans. R. Soc. B. doi: 10.1098/rstb.2007.2080, pp. 1-12. IF: 5.6 [pdf, 586.6k]
  • > Blake, W.J., Balázsi, G., Kohanski, M.A., Isaacs, F.J., Murphy, K.F., Kuang, Y., Cantor, C.R., Walt, D.R., Collins, J.J. (2006): Phenotypic consequences of promoter-mediated transcriptional noise. - Mol. Cell 24(6): 853-865. IF: 12.93 [pdf, 1277k]
  • > Balázsi, G., Barabási, A.L., Oltvai, Z.N. (2005): Topological units of environmental signal processing in the transcriptional-regulatory network of Escherichia coli. - Proc. Nat. Acad. Sci., USA. 102(22): 7841-7846. IF: 10.23 [pdf, 656.8k]
  • > Balázsi, G., Oltvai, Z.N. (2005): Sensing Your Surroundings: How Transcription Regulatory Networks of the Cell Discern Environmental Signals. Invited Review. - Sci. STKE 282 pe20: 1-3. IF: 30.927 [pdf, 60.2k]
  • > Tong, X., Campbell, J.W., Balázsi, G., Kay, K.A., Wanner, B.L., Gerdes, S.Y., Oltvai, Z.N. (2004): Genome-scale identification of conditionally essential genes in E. coli by DNA microarrays. - Biochem. Biophys. Res. Commun. 322(1): 347 354. IF: 2.904 [pdf, 744.3k]
  • > Balázsi, G., Cornell-Bell, A.H., Moss, F. (2003): Increased phase synchronization of spontaneous calcium oscillations in epileptic human versus normal rat astrocyte cultures. - Chaos 13(2): 515-518. IF: 1.799 [pdf, 506.4k]
  • > Balázsi, G., Kay, K.A., Barabási, A.L., Oltvai, Z.N. (2003): Spurious spatial periodicity of co-expression in microarray data due to printing design. - Nucl. Acids Res. 31(15): 4425-4433. IF: 6.575 [pdf, 438.3k]
  • > Balázsi, G., Moss, F. (2003): Stochastic Resonance: Examples from Sensory, Perceptive and Behavioral Neuroscience and Chemistry. - In: Nova Acta Leopoldina. Proc. German Academy of Natural Sciences, Halle. NF 88, Nr. 332: 57 76.
  • > Gerdes, S.Y., Scholle, M.D., Campbell, J.W., Balázsi, G., Ravasz, E., Daugherty, M.D., Somera, A.L., Kyrpides, N.C., Anderson, I., Gelfand, M.S., Bhattacharya, A., Kapatral, V., D'Souza, M., Baev, M.V., Mseeh, F., Fonstein, M.Y., Overbeek, R., Barabási, A.L., Oltvai, Z.N., Osterman, A.L. (2003): Experimental Determination and System-Level Analysis of Essential Genes in Escherichia coli MG1655. - J. Bact. 185(19): 5673-5684. IF: 4.175 [pdf, 2568.7k]
  • > Ordemann, A., Balázsi, G., Caspari, E., Moss, F. (2003): Daphnia swarms: from single agent dynamics to collective vortex formation. - SPIE Proceedings Series 5110: 172-179. [pdf, 443.4k]
  • > Ordemann, A., Balázsi, G., Moss, F. (2003): Motions of Daphnia in a Light Field: Random Walks with a Zooplankton. - In: Nova Acta Leopoldina. Proc. German Academy of Natural Sciences, Halle. NF 88, Nr. 332: 87 103.
  • > Ordemann, A., Balázsi, G., Moss, F. (2003): Pattern formation and stochastic motion of the zooplankton Daphnia in a light field. - Physica A 325: 260-266. IF: 1.18 [pdf, 139.4k]
  • > Karsai, I., Balázsi, G. (2002): Organization of Work via a Natural Substance: Regulation of Nest Construction in Social Wasps. — J. theor. Biol. 218: 549-565. IF: 2.45 [pdf, 523.4k]
  • > Balázsi, G., Cornell-Bell, A., Neiman, A.B., Moss, F. (2001): Synchronization of Hyperexcitable Systems with Phase-Repulsive Coupling. - Phys. Rev. E 64 e041912: 1-8. IF: 2.48 [pdf, 397k]
  • > Balázsi, G., Kish, L.B., Moss, F. (2001): Spatiotemporal Stochastic Resonance and its consequences in neural model systems. - Chaos 11(3): 563-569. IF: 2.15 [pdf, 243.8k]
  • > Balázsi, G., Kish, L.B. (2000): From Stochastic Resonance to Brain Waves. - Physics Letters A 265: 304-316. IF: 1.96 [pdf, 396.8k]

Book chapters

  • > Nevozhay D, Adams R, Balázsi, G. (2010): Linearizer gene circuits with negative feedback regulation. - In: Becskei, A. (ed.): Methods in Molecular Biology Yeast Genetic Networks: Methods and Protocols. Humana Press Inc., Totowa, NJ (in press).
  • > Balázsi, G. (2008): Statistical evaluation of genetic footprinting data. - In: Osterman, A., Gerdes, S.Y. (eds.): Methods in Molecular Biology, vol. 416. Microbial Gene Essentiality. Humana Press Inc., Totowa, NJ, pp. 355-359. [pdf, 137.3k]
  • > Balázsi, G. (2007): Zajos gerjeszthető rendszerek dinamikája térben és időben.- In: Kovács, J.-Sz., Bakk, M., Sylvester, Z. (eds.): Háromszéki kutatók doktori disszertációi. Cultural Centre of Covasna County and Foundation of the Székely National Museum, Sfîntu Gheorghe, Romania, pp. 169-180.
  • > Balázsi, G., Oltvai, Z.N. (2007): A Pitfall in Series of Microarrays: The Position of Probes Affects the Cross Correlation of Gene Expression Profiles. - In: Korenberg, M.J. (ed.): Microarray Data Analysis: Methods and Applications. Humana Press Inc., Totowa, NJ, USA
  • > Balázsi, G., Ordemann, A.F., Moss, F. (2003): Stochastic Synchronization: Analogy with Systems Undergoing Phase Transition. - In: Bezrukov, S.M. (ed.). Proc. 3rd Int. Conf. on Unsolved Problems of Noise and Fluctuations in Physics, Biology, and High Technology, AIP Conference Proceedings. 665(1): 94-99.
  • > Loerincz, K., Balázsi, G., Gingl, Z., Kiss, L.B (1996): Stochastic Resonance at Phase Noise. In: Doering, Ch., Kiss, L.B., Shlesinger, M. (eds.): Unsolved Problems of Noise, Proceedings of the 1st international conference on Unsolved Problems of Noise (UPoN'96), Szeged, Hungary, 1996, World Scientific, Singapore (1997). [pdf, 144.7k]